Package: snpReady 0.9.7

snpReady: Preparing Genotypic Datasets in Order to Run Genomic Analysis

Three functions to clean, summarize and prepare genomic datasets to Genome Selection and Genome Association analysis and to estimate population genetic parameters.

Authors:Italo Granato [aut, cre], Roberto Fritsche-Neto [aut, ths]

snpReady_0.9.7.tar.gz
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snpReady_0.9.7.tar.gz(r-4.5-noble)snpReady_0.9.7.tar.gz(r-4.4-noble)
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snpReady.pdf |snpReady.html✨
snpReady/json (API)

# Install 'snpReady' in R:
install.packages('snpReady', repos = c('https://italo-granato.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/italo-granato/snpready/issues

Datasets:

On CRAN:

Conda:

5.90 score 4 stars 33 scripts 330 downloads 6 mentions 3 exports 36 dependencies

Last updated 5 years agofrom:ddb7eee245. Checks:3 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 30 2025
R-4.5-winNOTEMar 30 2025
R-4.5-macNOTEMar 30 2025
R-4.5-linuxNOTEMar 30 2025
R-4.4-winNOTEMar 30 2025
R-4.4-macNOTEMar 30 2025
R-4.4-linuxNOTEMar 30 2025
R-4.3-winOKMar 30 2025
R-4.3-macOKMar 30 2025

Exports:G.matrixpopgenraw.data

Dependencies:base64encbslibcachemclidigestevaluatefastmapfontawesomefsgluehighrhtmltoolshtmlwidgetsimputejquerylibjsonliteknitrlatticelifecyclemagrittrMatrixmatrixcalcmemoisemimeR6rappdirsrglrlangrmarkdownsassstringistringrtinytexvctrsxfunyaml

snpReady: a helper tool to run genomic analysis

Italo Granato and Roberto Fritsche-Neto

Rendered fromsnpReady-vignette.Rmdusingknitr::rmarkdownon Mar 30 2025.

Last update: 2018-05-07
Started: 2017-07-14